QuickBooks vs OnPay
A head-to-head comparison to help you pick the right tool
Last updated: September 14, 2026
QuickBooks is our recommended pick for most teams — small to mid-size us businesses wanting the industry standard accounting software.
Try QuickBooks →Read our full QuickBooks review →QuickBooks
QuickBooks is the world's leading accounting software for small and mid-size businesses. Built by Intuit, it handles bookkeeping, invoicing, payroll, tax preparation, and financial reporting in one platform. QuickBooks is used by over 7 million businesses worldwide and is the de facto standard for small business accounting in the US.
OnPay
OnPay is a full-service payroll and HR platform designed for small and mid-size businesses. It offers unlimited payroll runs, automatic tax filing, and built-in HR tools at an affordable flat rate. OnPay is consistently rated as one of the best value payroll solutions for small businesses and supports a wide range of industries including restaurants, farms, and nonprofits.
Pros
- ✓Industry standard — most accountants and bookkeepers are familiar with QuickBooks
- ✓Comprehensive feature set covering all accounting needs
- ✓Strong ecosystem of integrations with 750+ apps
- ✓Excellent tax preparation and filing tools
Cons
- ✗Can be expensive as you add features and users
- ✗Steeper learning curve than simpler alternatives
- ✗Customer support quality has declined according to many users
- ✗Price increases frequently frustrate long-term customers
Pros
- ✓Excellent value — flat monthly pricing with no per-run fees
- ✓Supports multiple pay schedules and unlimited payroll runs
- ✓Strong industry-specific features for restaurants, farms, and nonprofits
- ✓US-based customer support included on all plans
Cons
- ✗US-only — no international payroll support
- ✗Mobile app is less polished than competitors
- ✗Limited advanced HR features compared to full HRIS platforms
QuickBooks vs OnPay: Side by Side
| Factor | QuickBooks | OnPay |
|---|---|---|
| User Rating | 4.6/5 ★ | N/A |
| Category | Accounting Software | Payroll Software |
| Pricing Model | Paid | Paid |
| Starting Price | $30/mo | $40/mo + $6/person |
| Best For | Small to mid-size US businesses wanting the industry standard accounting software | Small businesses wanting affordable, full-service payroll with no hidden fees |
| Our Pick | 🏆 Recommended | — |
QuickBooks Features
- ✓Bookkeeping
- ✓invoicing
- ✓expense tracking
- ✓payroll
- ✓tax preparation
- ✓financial reporting
- ✓bank reconciliation
- ✓inventory management
- ✓mobile app
- ✓integrations
OnPay Features
- ✓Unlimited payroll runs
- ✓automatic tax filing
- ✓direct deposit
- ✓employee self-service
- ✓HR tools
- ✓benefits administration
- ✓PTO management
- ✓integrations
Pricing Comparison
QuickBooks
PaidStarts at $30/mo
Simple Start: $30/mo · Essentials: $60/mo · Plus: $90/mo · Advanced: $200/mo
See full pricing →Best Use Cases
QuickBooks
- →Small businesses managing invoicing and expenses
- →Self-employed professionals tracking income and taxes
- →Companies wanting accounting software with payroll add-on
Who Should NOT Use These Tools
QuickBooks is NOT ideal for:
- ✗Large enterprises needing multi-entity accounting
- ✗Companies requiring advanced inventory management
- ✗Businesses outside North America
Integrations
QuickBooks
Shopify, PayPal, Stripe, Square, Gusto, TSheets, HubSpot, Salesforce, Expensify
Our Take
Choose QuickBooks if small to mid-size us businesses wanting the industry standard accounting software. Choose OnPay if small businesses wanting affordable, full-service payroll with no hidden fees.
Best For
Small to mid-size US businesses wanting the industry standard accounting software
Best For
Small businesses wanting affordable, full-service payroll with no hidden fees
Also Consider
If neither QuickBooks nor OnPay is the right fit, Dext is worth evaluating.
Dext
Bookkeepers, accountants, and businesses with high receipt volumes wanting to eliminate manual data entry
From $15/mo
Frequently Asked Questions
What is the difference between QuickBooks and OnPay?
QuickBooks is best for small to mid-size us businesses wanting the industry standard accounting software. OnPay is best for small businesses wanting affordable, full-service payroll with no hidden fees.
Which is better, QuickBooks or OnPay?
Choose QuickBooks if small to mid-size us businesses wanting the industry standard accounting software. Choose OnPay if small businesses wanting affordable, full-service payroll with no hidden fees.
How much does QuickBooks cost?
QuickBooks starts at $30/mo. Pricing model: Paid.
How much does OnPay cost?
OnPay starts at $40/mo + $6/person. Pricing model: Paid.
Who should use QuickBooks?
Small to mid-size US businesses wanting the industry standard accounting software
Who should use OnPay?
Small businesses wanting affordable, full-service payroll with no hidden fees